{
  "_id": "6a480864e06c18f0a65293e5",
  "Package": "cbmc",
  "Title": "Raw and Processed Matrices of the CITE-seq CBMC Dataset",
  "Version": "0.1.0",
  "Authors@R": "c(\nperson(\ngiven = 'Paul',\nfamily = 'Hoffman',\nemail = 'hoff0792@alumni.umn.edu',\nrole = c('aut', 'cre'),\ncomment = c(ORCID = '0000-0002-7693-8957'))\n)",
  "Description": "Provides expression matrices from 8,617 cord blood\nmononuclear cells generated with CITE-seq. The CITE-seq\ntechnique and CBMC dataset are described in\n<doi:10.1038/nmeth.4380>",
  "URL": "https://mojaveazure.r-universe.dev/cbmc,\nhttps://github.com/mojaveazure/cbmc",
  "BugReports": "https://github.com/mojaveazure/cbmc/issues",
  "License": "CC BY 4.0",
  "Encoding": "UTF-8",
  "BuildResaveData": "best",
  "RoxygenNote": "7.3.2",
  "Repository": "https://mojaveazure.r-universe.dev",
  "Date/Publication": "2025-01-07 21:02:36 UTC",
  "RemoteUrl": "https://github.com/mojaveazure/cbmc",
  "RemoteRef": "HEAD",
  "RemoteSha": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-03 18:56:59 UTC",
    "User": "root"
  },
  "Author": "Paul Hoffman [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-7693-8957>)",
  "Maintainer": "Paul Hoffman <hoff0792@alumni.umn.edu>",
  "_user": "mojaveazure",
  "_type": "src",
  "_file": "cbmc_0.1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/f113b00d7e0fc081d3ffd2da13ff6c2d92318265b0eb47b8526a18436264cb93",
  "_filesize": 30139437,
  "_sha256": "f113b00d7e0fc081d3ffd2da13ff6c2d92318265b0eb47b8526a18436264cb93",
  "_expires": "2026-10-11T19:07:12.000Z",
  "_created": "2026-07-03T18:56:59.000Z",
  "_published": "2026-07-03T19:07:16.211Z",
  "_jobs": [
    {
      "job": 85058035905,
      "time": 217,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8073372649"
    },
    {
      "job": 85058035860,
      "time": 211,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8073371491"
    },
    {
      "job": 85058035869,
      "time": 211,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8073371121"
    },
    {
      "job": 85058035873,
      "time": 137,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8073355960"
    },
    {
      "job": 85057060938,
      "time": 508,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8073328238"
    },
    {
      "job": 85058035857,
      "time": 202,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8073369479"
    },
    {
      "job": 85058035891,
      "time": 113,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "8073351423"
    },
    {
      "job": 85058035910,
      "time": 145,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "8073357886"
    },
    {
      "job": 85058035867,
      "time": 142,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "8073357356"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764",
  "_status": "success",
  "_upstream": "https://github.com/mojaveazure/cbmc",
  "_commit": {
    "id": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
    "author": "Paul Hoffman <mojaveazure@users.noreply.github.com>",
    "committer": "Paul Hoffman <mojaveazure@users.noreply.github.com>",
    "message": "initial commit\n",
    "time": 1736283756
  },
  "_maintainer": {
    "name": "Paul Hoffman",
    "email": "hoff0792@alumni.umn.edu",
    "login": "mojaveazure",
    "bluesky": "@mojaveazure.bsky.social",
    "linkedin": "in/pauljhoffman",
    "orcid": "0000-0002-7693-8957",
    "description": "Software engineer @TileDB-Inc; formerly @satijalab, @LappalainenLab, and @MorrellLAB",
    "uuid": 11035068
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "Matrix",
      "version": ">= 1.7.1",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 4.4",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "data.table",
      "role": "Suggests"
    },
    {
      "package": "R.utils",
      "role": "Suggests"
    },
    {
      "package": "rprojroot",
      "role": "Suggests"
    },
    {
      "package": "Seurat",
      "role": "Enhances"
    },
    {
      "package": "SeuratObject",
      "role": "Enhances"
    }
  ],
  "_owner": "mojaveazure",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "mojaveazure",
      "count": 1,
      "uuid": 11035068
    }
  ],
  "_userbio": {
    "uuid": 11035068,
    "type": "user",
    "name": "Paul Hoffman",
    "followers": 249,
    "description": "Software engineer @TileDB-Inc; formerly @satijalab, @LappalainenLab, and @MorrellLAB"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/cbmc"
  },
  "_devurl": "https://github.com/mojaveazure/cbmc",
  "_searchresults": 0,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/cbmc.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [],
  "_datasets": [
    {
      "name": "cbmc.adt",
      "title": "CBMC",
      "object": "cbmc.adt",
      "file": "cbmc.adt.norm.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.adt.norm",
      "title": "CBMC Normalized",
      "object": "cbmc.adt.norm",
      "file": "cbmc.adt.norm.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.annotations",
      "title": "CBMC Annotations",
      "object": "cbmc.annotations",
      "file": "cbmc.annotations.csv.bz2",
      "class": [
        "data.frame"
      ],
      "fields": [
        "rna_annotations",
        "protein_annotations"
      ],
      "rows": 8617,
      "table": true,
      "tojson": true
    },
    {
      "name": "cbmc.rna",
      "title": "CBMC",
      "object": "cbmc.rna",
      "file": "cbmc.rna.collapsed.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.rna.collapsed",
      "title": "CBMC Collapsed",
      "object": "cbmc.rna.collapsed",
      "file": "cbmc.rna.collapsed.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.rna.norm",
      "title": "CBMC Normalized",
      "object": "cbmc.rna.norm",
      "file": "cbmc.rna.norm.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "cbmc",
      "title": "CBMC",
      "topics": [
        "cbmc",
        "cbmc.adt",
        "cbmc.rna"
      ]
    },
    {
      "page": "cbmc.annotations",
      "title": "CBMC Annotations",
      "topics": [
        "cbmc.annotations"
      ]
    },
    {
      "page": "cbmc.norm",
      "title": "CBMC Normalized",
      "topics": [
        "cbmc.adt.norm",
        "cbmc.norm",
        "cbmc.rna.norm"
      ]
    },
    {
      "page": "cbmc.rna.collapsed",
      "title": "CBMC Collapsed",
      "topics": [
        "cbmc.rna.collapsed"
      ]
    }
  ],
  "_rundeps": [
    "lattice",
    "Matrix"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "cbmc",
  "_universes": [
    "mojaveazure"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-07-03T19:05:36.000Z",
      "distro": "resolute",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/af09ca494b80260f9bbcb88fc3d4bab9b0a62b7f13af89eafe151e6d3b933922",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-07-03T19:05:38.000Z",
      "distro": "resolute",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/24cf72b576a59387e79f81076222af7e0961bb5ec216b6745061e2a44cca9c01",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-07-03T19:05:13.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/e1185561b26edc79add8961415cc5225ff2fcdca2ff70ac3e2b53fd59f2b8105",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-07-03T19:04:31.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/42f90fb4cd04e988f17efef73dc756b035fad7d4f76f39bae513c3915625ff6b",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-07-03T19:06:20.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/8a352d6346ad66be11c44ba938398d56ba4b63798414bcff8d72701dd59006b4",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-07-03T19:04:11.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/f24222deb995b39b0253241b540bf1d1442a5af529018a9323dc544aa245794a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-07-03T19:04:29.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/2b2d3037ef0d46d430feacd2d8f07ccf040dd1852e9787ff32915f8b18c72dbc",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-07-03T19:04:25.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "https://r2.ropensci.org/7532ef1910554c50219adc0cfb0b1249cc046715479d6c39cc50dcf7f92c8a65",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/28678532764"
    }
  ]
}