{
  "_id": "6a17f2b8acfb0bcc41da790d",
  "Package": "cbmc",
  "Title": "Raw and Processed Matrices of the CITE-seq CBMC Dataset",
  "Version": "0.1.0",
  "Authors@R": "c(\nperson(\ngiven = 'Paul',\nfamily = 'Hoffman',\nemail = 'hoff0792@alumni.umn.edu',\nrole = c('aut', 'cre'),\ncomment = c(ORCID = '0000-0002-7693-8957'))\n)",
  "Description": "Provides expression matrices from 8,617 cord blood\nmononuclear cells generated with CITE-seq. The CITE-seq\ntechnique and CBMC dataset are described in\n<doi:10.1038/nmeth.4380>",
  "URL": "https://mojaveazure.r-universe.dev/cbmc,\nhttps://github.com/mojaveazure/cbmc",
  "BugReports": "https://github.com/mojaveazure/cbmc/issues",
  "License": "CC BY 4.0",
  "Encoding": "UTF-8",
  "BuildResaveData": "best",
  "RoxygenNote": "7.3.2",
  "Repository": "https://mojaveazure.r-universe.dev",
  "Date/Publication": "2025-01-07 21:02:36 UTC",
  "RemoteUrl": "https://github.com/mojaveazure/cbmc",
  "RemoteRef": "HEAD",
  "RemoteSha": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-28 07:34:13 UTC",
    "User": "root"
  },
  "Author": "Paul Hoffman [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-7693-8957>)",
  "Maintainer": "Paul Hoffman <hoff0792@alumni.umn.edu>",
  "MD5sum": "2124fe7670a76fd53950c2283aebeadf",
  "_user": "mojaveazure",
  "_type": "src",
  "_file": "cbmc_0.1.0.tar.gz",
  "_fileid": "b56033324f5ff9d78d54e949bd2b4b15ae12b6b59eed1db618afcdc8637298fe",
  "_filesize": 30139684,
  "_sha256": "b56033324f5ff9d78d54e949bd2b4b15ae12b6b59eed1db618afcdc8637298fe",
  "_created": "2026-05-28T07:34:13.000Z",
  "_published": "2026-05-28T07:45:59.996Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78245610580,
      "time": 239,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7260378569"
    },
    {
      "job": 78245610513,
      "time": 193,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7260364060"
    },
    {
      "job": 78245610529,
      "time": 145,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7260349067"
    },
    {
      "job": 78245610500,
      "time": 125,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7260343576"
    },
    {
      "job": 78244398324,
      "time": 501,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7260303483"
    },
    {
      "job": 78245610511,
      "time": 155,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7260352232"
    },
    {
      "job": 78245610530,
      "time": 162,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7260354640"
    },
    {
      "job": 78245610641,
      "time": 296,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7260396848"
    },
    {
      "job": 78245610540,
      "time": 196,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7260365219"
    }
  ],
  "_buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/mojaveazure/cbmc",
  "_commit": {
    "id": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
    "author": "Paul Hoffman <mojaveazure@users.noreply.github.com>",
    "committer": "Paul Hoffman <mojaveazure@users.noreply.github.com>",
    "message": "initial commit\n",
    "time": 1736283756
  },
  "_maintainer": {
    "name": "Paul Hoffman",
    "email": "hoff0792@alumni.umn.edu",
    "login": "mojaveazure",
    "bluesky": "@mojaveazure.bsky.social",
    "linkedin": "in/pauljhoffman",
    "orcid": "0000-0002-7693-8957",
    "description": "Software engineer @TileDB-Inc; formerly @satijalab, @LappalainenLab, and @MorrellLAB",
    "uuid": 11035068
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "Matrix",
      "version": ">= 1.7.1",
      "role": "Depends"
    },
    {
      "package": "R",
      "version": ">= 4.4",
      "role": "Depends"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "data.table",
      "role": "Suggests"
    },
    {
      "package": "R.utils",
      "role": "Suggests"
    },
    {
      "package": "rprojroot",
      "role": "Suggests"
    },
    {
      "package": "Seurat",
      "role": "Enhances"
    },
    {
      "package": "SeuratObject",
      "role": "Enhances"
    }
  ],
  "_owner": "mojaveazure",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "mojaveazure",
      "count": 1,
      "uuid": 11035068
    }
  ],
  "_userbio": {
    "uuid": 11035068,
    "type": "user",
    "name": "Paul Hoffman",
    "description": "Software engineer @TileDB-Inc; formerly @satijalab, @LappalainenLab, and @MorrellLAB"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/cbmc"
  },
  "_devurl": "https://github.com/mojaveazure/cbmc",
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/cbmc.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [],
  "_datasets": [
    {
      "name": "cbmc.adt",
      "title": "CBMC",
      "object": "cbmc.adt",
      "file": "cbmc.adt.norm.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.adt.norm",
      "title": "CBMC Normalized",
      "object": "cbmc.adt.norm",
      "file": "cbmc.adt.norm.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.annotations",
      "title": "CBMC Annotations",
      "object": "cbmc.annotations",
      "file": "cbmc.annotations.csv.bz2",
      "class": [
        "data.frame"
      ],
      "fields": [
        "rna_annotations",
        "protein_annotations"
      ],
      "rows": 8617,
      "table": true,
      "tojson": true
    },
    {
      "name": "cbmc.rna",
      "title": "CBMC",
      "object": "cbmc.rna",
      "file": "cbmc.rna.collapsed.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.rna.collapsed",
      "title": "CBMC Collapsed",
      "object": "cbmc.rna.collapsed",
      "file": "cbmc.rna.collapsed.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "cbmc.rna.norm",
      "title": "CBMC Normalized",
      "object": "cbmc.rna.norm",
      "file": "cbmc.rna.norm.rda",
      "class": [
        "dgCMatrix"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "cbmc",
      "title": "CBMC",
      "topics": [
        "cbmc",
        "cbmc.adt",
        "cbmc.rna"
      ]
    },
    {
      "page": "cbmc.annotations",
      "title": "CBMC Annotations",
      "topics": [
        "cbmc.annotations"
      ]
    },
    {
      "page": "cbmc.norm",
      "title": "CBMC Normalized",
      "topics": [
        "cbmc.adt.norm",
        "cbmc.norm",
        "cbmc.rna.norm"
      ]
    },
    {
      "page": "cbmc.rna.collapsed",
      "title": "CBMC Collapsed",
      "topics": [
        "cbmc.rna.collapsed"
      ]
    }
  ],
  "_rundeps": [
    "lattice",
    "Matrix"
  ],
  "_score": 1,
  "_indexed": true,
  "_nocasepkg": "cbmc",
  "_universes": [
    "mojaveazure"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-28T07:43:20.000Z",
      "distro": "noble",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "cb1a82d6ecc2c1c2a0446a24e84507c21153347581450ac048393f91a79cb056",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-28T07:42:41.000Z",
      "distro": "noble",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "df617b4ec34a08e7206379f22b950013b0fe18f890a62d43b55db6822f311e4f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-28T07:42:10.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "d515444e6c840560cf6cf1ff640470a45937bab549e4fd9cbdba3c269b48aaee",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-28T07:42:00.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "e76868e9d889c7a6d9b581e48a4e5722070b531b22d4e119c765d636f8555af0",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-05-28T07:43:04.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "0e7e381f673c72d8e0d2bede8318cef0e73d7a8764a1febe5cc64bec7332d4dc",
      "status": "success",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-28T07:42:07.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "e024492ba30aeaa65cf895d1aa8572fa13aefbdfc6d634b72e1b23466805e2f0",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-28T07:44:27.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "4400c27f581ae4c57ad1e45d90d3513a88e133ff813b4cf005fed15f5113827c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-28T07:42:42.000Z",
      "commit": "6e19a6e101f455a4fdb81771e792660bfe9c54c2",
      "fileid": "27e11e047b096a178f9b5f0cb650853eaf74ba6a8a57c7652cd4a696eb1959c8",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/mojaveazure/actions/runs/26561182280"
    }
  ]
}