Package: tiledbsoma 1.8.1
tiledbsoma: 'TileDB' Stack of Matrices, Annotated ('SOMA')
Interface for working with 'TileDB'-based Stack of Matrices, Annotated ('SOMA'): an open data model for representing annotated matrices, like those commonly used for single cell data analysis. It is documented at <https://github.com/single-cell-data>; a formal specification available is at <https://github.com/single-cell-data/SOMA/blob/main/abstract_specification.md>.
Authors:
tiledbsoma_1.8.1.tar.gz
tiledbsoma_1.8.1.tar.gz(r-4.4-noble)
tiledbsoma.pdf |tiledbsoma.html✨
tiledbsoma/json (API)
NEWS
# Install 'tiledbsoma' in R: |
install.packages('tiledbsoma', repos = c('https://mojaveazure.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/single-cell-data/tiledb-soma/issues
Last updated 5 months agofrom:9f8ed9555a (on ph/test/doublepin). Checks:ERROR: 1. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | FAIL | Aug 29 2024 |
Exports:ConfigListEphemeralCollectionEphemeralCollectionBaseEphemeralExperimentEphemeralMeasurementextract_datasetlist_datasetsload_datasetMappingBasematrixZeroBasedViewPlatformConfigReadIterScalarMapset_log_levelshow_package_versionsSOMAAxisIndexerSOMAAxisQuerySOMAAxisQueryResultSOMACollectionSOMACollectionBaseSOMACollectionCreateSOMACollectionOpenSOMAContextBaseSOMADataFrameSOMADataFrameCreateSOMADataFrameOpenSOMADenseNDArraySOMADenseNDArrayCreateSOMADenseNDArrayOpenSOMAExperimentSOMAExperimentAxisQuerySOMAExperimentCreateSOMAExperimentOpenSOMAMeasurementSOMAMeasurementCreateSOMAMeasurementOpenSOMANDArrayBaseSOMAOpenSOMASparseNDArraySOMASparseNDArrayCreateSOMASparseNDArrayOpenSOMASparseNDArrayReadSOMATileDBContextSparseReadIterTableReadIterTileDBArrayTileDBCreateOptionsTileDBGroupTileDBObjecttiledbsoma_stats_disabletiledbsoma_stats_dumptiledbsoma_stats_enabletiledbsoma_stats_resettiledbsoma_stats_showwrite_soma
Dependencies:arrowassertthatbitbit64clicpp11data.tablefansifsgluelatticelifecyclemagrittrMatrixnanoarrownanotimepillarpkgconfigpurrrR6RcppRcppCCTZRcppDateRcppInt64RcppSpdlogrlangspdltibbletidyselecttiledbtriebeardurltoolsutf8vctrswithrzoo